Joint PSI/EFSPI Vaccine SIG Webinar: Statistical and Mechanistic Models for Correlates of Protection
This webinar will explore two different approaches to Correlates of Protection in vaccine development.
Data Visualisation Resources
| Graphics Principles | |
|---|---|
| Novartis materials • Excellent source • Pharma-relevant examples | Chart Guide • Interactive guide for choosing graph type • Printable poster |
| Coding Reference (R) | |
| RStudio Data Visualisation Cheatsheet • ggplot2 overview (poster) | Look at Data • Practical data visualisation using R |
| Coding Reference (SAS) | |
| SAS data visualization • Overview of SAS graphics tools Graphically Speaking • Active forum for users of SAS ODS Graphics Perry Watts Library • Unstructured collection of papers on SAS graphics | Graph Samples Gallery (SAS Support) • Example SAS code • Unstructured • Not pharma-specific Robert Allisons SAS Graphics Examples • Example SAS code • Unstructured • Not pharma-specific |
| Coding Reference (Python) | |
| Seaborn • Unstructured gallery • Example python code | |
| Inspiration | |
| D3 Gallery • Extensive gallery of graph types | R graph gallery • Example R code (ggplot2 and base R) • Well structured |
| Dashboard Examples | |
R Shiny - Gallery (rstudio.com) • Extensive gallery of example • Example R code
Roche Teal https://genentech.shinyapps.io/teal_efficacy/ https://genentech.shinyapps.io/teal_exploratory/ https://genentech.shinyapps.io/teal_efficacy/ Safety Graphics https://jwildfire.shinyapps.io/safetyGraphics/ Interactive Graphics for Monitoring Clinical Trial Safety • safetyGraphics
| • Extensive gallery of examples • Active community
TIBCO Spotfire® Interactive Demo Gallery
|
| Colour | |
| Color Brewer • Tool for designing colour palettes • Easy to use for beginners Chroma.js • Tool for designing multi-hue colour palettes • More advanced tool | Adobe Color Wheel • Tool for designing colour palettes • More advanced tool Color Oracle Downloadable tool for simulating colour-blindness |
| Online Books | |
| Winston Chang R Graphics Cookbook | Claus Wilke Fundamentals of Data Visualization |
| Books | |||
|---|---|---|---|
| Alberti Cariro | ‘How Charts Lie’ ‘The Truthful Art: Data, Charts and Maps for Communication’ ‘The Functional Art’ | Winston Chang | R Graphics Cookbook: Practical Recipes for Visualizing Data. USA: O’Reilly Media, Inc.: 2012 |
| William S. Cleveland | The Elements of Graphing Data | Stephen Few | ‘Show Me the Numbers: Designing Tables and Graphs to Enlighten’ ‘Now You See It’ |
| RM Heiberger, B Holland | Statistical Analysis and Data Display: An Intermediate Course with Examples in R. New York: Springer; 2015 | A Krause, M O’Connell | A Picture Is Worth a Thousand Tables: Graphics in Life Sciences. New York: Springer Sciences & Business Media; 2012 |
| Tamara Munzner | Visualization Analysis & Design link | Cole Nussbaumer Knaflic | Storytelling with Data link |
| AK Peters | Visualization Analysis and Design | Sandra Rendgen | History of Information Graphics |
| NB Robbins | Creating More Effective Graphs. Hoboken, New Jersey: Wiley; 2012 | Edward Tufte | The Visual Display of Quantitative Information. Cheshire, CT: Graphics Press 1983 |
| John W. Tukey | Exploratory Data Analysis. Reading, MA: Pearson; 1977 | Wexler, Shaffer, Cotgreave | The Big Book of Dashboards link |
| L Wilkinson | The Grammar of Graphics. New York: Springer; 2006 | Nathan Yau | Visualise This |
| Publications | ||
|---|---|---|
| SP Duke, F Bancken, B Crowe, M Soukup, T Botsis, R Forshee | Seeing is Believing: Good Graphic Design Principles For Medical Research | Stat Med. 2015;34(22):3040-3059 |
| M Krzywinski | Elements of Visual Style | Nat Methods. 2013;10:371 |
| Hadley Wickham | A Layered Grammar of Graphics. http://vita.had.co.nz/papers/layered-grammar.pdf | J. Computations and Graphical Statistics, Volume 19, Number 1, Pages 3-28 |
| Swihart et al | Lasagna plots: A saucy alternative to spaghetti plots. | Epidemiology. 21(5): 621–625 |
| Vandemeulebroecke et al. | How can we make better graphs? An initiative to increase the graphical expertise and productivity of quantitative scientists. | Pharmaceutical Statistics 18(1), 106 - 114 |
| Amit et al | Graphical Approaches to the Analysis of Safety Data from Clinical Trials. | Pharmaceutical Statistics 7(1), 20-35 |
| Blogs | |
|---|---|
| Darkhorse • General principles • Diverse topics (non-pharma) | Nightingale • Journal of the Data Visualization Society • Diverse topics (non-pharma) |
| Podcasts | |
| Data Stories Storytelling With Data | Explore Explain The Effective Statistician |
| Miscellaneous | |
CTSpedia: Clinical Trials Safety Graphics StatGraphCourse < Main < Vanderbilt Biostatistics Wiki (vumc.org) • Frank Farrell | Michael Friendly • Rich source of information on data visualisation principles and software WTF Gallery • Gallery of bad graphics (for fun!) Makeover Monday; Improving How We Visualize and Analyze Data, One Chart at a Time |
